Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021154.1 Corchorus olitorius cultivar O-4 contig21187, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11163

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
802--845
13
3.0
15
75
18
56
31
11
0
56
1.35
1767--1935
91
1.8
92
93
1
295
29
10
21
38
1.87
2347--2383
15
2.5
15
95
0
65
37
5
0
56
1.22
2378--2427
21
2.4
20
83
9
64
50
0
6
44
1.26
2403--2436
15
2.3
15
89
0
50
61
0
2
35
1.11
3371--3424
2
27.0
2
100
0
108
0
0
50
50
1.00
8961--9035
32
2.3
32
79
4
80
25
6
17
50
1.70
8961--9086
64
2.0
64
82
6
157
24
10
16
48
1.77
9345--9373
9
3.3
9
90
9
51
13
0
44
41
1.44
10017--10105
31
2.9
31
84
1
126
39
12
14
33
1.84
10254--10560
154
2.0
153
85
4
422
50
3
9
36
1.52

Tables:   1

The End!