Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021168.1 Corchorus olitorius cultivar O-4 contig21201, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36456

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2943--2973
9
3.6
9
95
4
55
90
0
0
9
0.46
14777--14816
15
2.6
16
88
4
55
15
10
12
62
1.54
15696--15729
17
2.0
17
100
0
68
41
5
5
47
1.52
17530--17560
15
2.1
15
93
0
53
48
0
0
51
1.00
19447--19497
22
2.3
22
86
6
68
41
11
7
39
1.71
27568--27595
6
4.7
6
100
0
56
0
14
0
85
0.59
27966--28014
25
2.0
25
95
0
89
20
28
28
22
1.98

Tables:   1

The End!