Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021169.1 Corchorus olitorius cultivar O-4 contig21202, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35640

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1088--1136
25
2.0
25
91
0
80
20
28
30
20
1.98
11917--11961
21
2.1
21
87
0
63
15
22
31
31
1.95
11896--12039
76
1.9
76
81
8
177
18
29
27
23
1.98
13254--13467
39
5.5
39
90
0
338
39
18
20
21
1.92
27266--27291
11
2.4
11
100
0
52
7
15
7
69
1.35
32691--32725
18
2.0
18
88
5
54
45
8
8
37
1.65
34270--34295
11
2.4
11
100
0
52
7
15
7
69
1.35

Tables:   1

The End!