Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021173.1 Corchorus olitorius cultivar O-4 contig21206, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17212

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3572--3603
13
2.4
13
94
5
55
84
0
3
12
0.74
4499--5063
22
26.0
21
69
13
245
35
16
9
37
1.82
4794--4896
45
2.3
45
86
1
136
38
15
8
36
1.79
5169--5248
22
3.6
22
78
6
90
33
15
10
41
1.80
5297--5355
21
2.6
22
84
10
66
35
11
8
44
1.72
10627--10674
24
2.0
24
100
0
96
33
12
8
45
1.72
11222--11278
21
2.7
21
71
10
53
47
1
1
49
1.22
13595--13634
15
2.6
16
88
4
55
62
12
10
15
1.54
15340--15479
22
6.4
23
73
17
86
36
19
6
37
1.77
15488--15650
68
2.4
65
83
7
200
37
17
9
34
1.83
15484--15649
22
7.5
22
75
9
140
36
17
10
36
1.84

Tables:   1

The End!