Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021180.1 Corchorus olitorius cultivar O-4 contig21213, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10782

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1845--2174
43
7.8
41
75
10
292
40
25
9
24
1.86
1853--2174
41
7.6
41
73
12
244
40
25
9
24
1.86
1845--2170
84
3.9
84
82
3
406
40
25
9
24
1.85
1845--2169
168
1.9
169
89
3
503
40
25
9
24
1.85
2241--2265
2
12.5
2
100
0
50
48
0
0
52
1.00
4543--4584
15
2.7
15
92
3
66
64
14
9
11
1.50

Tables:   1

The End!