Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021184.1 Corchorus olitorius cultivar O-4 contig21217, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9749

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2610--2705
27
3.6
27
88
0
129
41
20
19
17
1.90
3057--3653
50
11.9
50
94
0
1023
28
12
27
31
1.93
4275--4462
50
3.8
48
82
8
223
32
14
18
34
1.91
5061--5122
21
2.9
21
80
7
54
19
0
8
72
1.09
5076--5122
22
2.2
21
88
3
67
21
0
4
74
0.99
5490--5536
9
5.8
8
80
14
60
14
10
0
74
1.07
5490--5537
26
1.9
25
91
8
80
14
10
0
75
1.06
6597--6680
42
2.0
42
88
0
123
41
13
22
22
1.88
6621--6715
42
2.3
42
87
8
133
41
10
24
24
1.86

Tables:   1

The End!