Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021187.1 Corchorus olitorius cultivar O-4 contig21220, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30334

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1266--1853
35
16.9
35
88
2
844
28
13
19
38
1.90
8493--9358
437
2.0
437
87
2
1249
36
19
11
32
1.88
9672--9728
30
1.9
30
85
7
80
40
7
21
31
1.80
10893--10932
19
2.2
19
86
4
55
12
7
7
72
1.27
19225--19281
29
2.0
29
82
6
71
42
3
19
35
1.68
20554--20608
21
2.6
21
77
5
58
23
5
7
63
1.41
27220--27289
36
1.9
36
91
0
113
34
18
10
37
1.84
29815--29863
15
3.3
15
82
0
62
46
2
44
6
1.39

Tables:   1

The End!