Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021188.1 Corchorus olitorius cultivar O-4 contig21221, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13859

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1342--1387
18
2.5
19
89
3
67
71
6
21
0
1.08
2371--2396
2
13.0
2
100
0
52
50
0
0
50
1.00
8532--8567
16
2.2
17
90
5
56
69
0
30
0
0.89
8549--8597
19
2.5
20
80
6
55
71
2
26
0
0.97
9860--10251
179
2.2
178
86
2
518
35
18
13
32
1.89
11733--11758
13
2.0
13
100
0
52
38
7
15
38
1.76
13405--13483
22
3.6
21
75
12
79
5
16
1
77
1.01
13408--13487
26
3.0
25
73
10
70
5
17
1
76
1.03

Tables:   1

The End!