Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021190.1 Corchorus olitorius cultivar O-4 contig21223, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9270

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3134--3175
21
2.0
22
90
4
68
23
28
11
35
1.91
5239--5281
22
1.9
23
90
4
70
81
0
13
4
0.84
5253--5282
12
2.5
12
88
0
51
83
0
10
6
0.81
5675--5773
5
19.6
5
71
20
55
67
13
2
17
1.32
5657--5761
19
6.1
18
69
25
68
68
12
1
17
1.29
5657--5738
31
2.5
32
92
7
139
69
12
2
15
1.29
6390--6539
50
3.0
50
92
0
237
32
14
14
38
1.86
6979--7134
79
2.0
79
92
0
258
30
20
13
35
1.91
7219--7601
50
7.7
50
92
0
615
30
28
13
27
1.94
7613--7793
50
3.6
50
92
0
290
33
10
27
28
1.90
8063--8137
28
2.7
28
89
2
116
20
20
24
36
1.95

Tables:   1

The End!