Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021193.1 Corchorus olitorius cultivar O-4 contig21226, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27849

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3446--4182
30
23.9
30
89
5
855
31
21
18
29
1.97
8553--8810
130
2.0
129
87
3
367
39
10
1
49
1.44
9436--9473
16
2.4
16
90
0
58
5
7
39
47
1.55
9692--9779
41
2.1
42
95
4
169
52
6
4
36
1.49
22331--22364
17
2.0
17
100
0
68
23
23
11
41
1.87
23283--23535
107
2.3
109
86
4
368
40
12
10
36
1.78
23831--23893
32
2.0
32
87
6
92
44
12
17
25
1.84
23979--24041
32
2.0
32
87
6
92
44
12
17
25
1.84
23823--24122
148
2.0
148
99
0
591
45
10
18
26
1.80

Tables:   1

The End!