Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021198.1 Corchorus olitorius cultivar O-4 contig21231, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7979

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2490--2520
15
2.1
15
100
0
62
12
35
12
38
1.82
2945--3119
45
3.9
45
97
0
323
37
22
8
32
1.83
4752--4880
45
2.9
45
96
2
233
34
6
21
36
1.81
6088--6131
22
2.0
22
90
0
70
27
25
22
25
2.00
6085--6185
52
1.9
52
94
4
177
23
27
23
24
2.00
6371--6402
16
2.0
16
100
0
64
37
25
18
18
1.94
6432--6475
21
2.1
21
86
0
61
27
20
18
34
1.96

Tables:   1

The End!