Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021199.1 Corchorus olitorius cultivar O-4 contig21232, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7495

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
374--500
27
4.7
27
87
2
112
40
23
16
18
1.90
403--500
27
3.6
27
90
0
142
41
25
15
17
1.88
806--1678
30
29.0
30
91
2
1214
47
18
13
20
1.82
806--1678
332
2.6
330
91
1
1363
47
18
13
20
1.82
1649--1776
38
3.3
39
83
7
156
48
15
14
21
1.81
4059--4092
6
5.5
6
96
3
59
0
20
0
79
0.73

Tables:   1

The End!