Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021201.1 Corchorus olitorius cultivar O-4 contig21234, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10033

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4807--4853
22
2.1
22
84
0
58
59
0
14
25
1.36
4730--4914
93
2.0
93
86
2
255
50
3
12
33
1.57
4950--5011
31
2.0
31
100
0
124
41
6
22
29
1.78
5249--5514
53
5.1
53
72
8
238
46
16
7
29
1.74
5200--5514
156
2.0
159
94
1
555
44
14
7
33
1.72
8182--8210
7
4.1
7
100
0
58
58
13
13
13
1.63

Tables:   1

The End!