Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021202.1 Corchorus olitorius cultivar O-4 contig21235, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20399

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
478--532
10
5.3
10
82
10
58
3
14
0
81
0.82
479--532
21
2.6
21
85
14
76
3
12
0
83
0.78
482--529
12
4.2
11
84
10
53
4
10
0
85
0.73
875--973
27
3.6
27
80
10
85
41
21
17
20
1.90
903--1000
27
3.6
27
87
0
133
42
24
15
17
1.87
10685--10865
35
5.1
36
86
2
233
17
16
20
45
1.86
10685--10862
71
2.5
72
81
3
227
17
16
19
46
1.85
15088--15125
16
2.5
15
87
8
51
7
15
0
76
1.01
19742--19778
15
2.4
16
90
4
58
64
10
10
13
1.49

Tables:   1

The End!