Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021204.1 Corchorus olitorius cultivar O-4 contig21237, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13119

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2366--2407
22
1.9
22
90
0
66
14
7
30
47
1.71
11922--11972
9
5.7
9
100
0
102
23
21
11
43
1.85
11979--12018
7
5.9
7
82
5
55
25
15
12
47
1.80
11976--12020
13
3.5
13
85
8
56
22
15
11
51
1.75
12327--12406
33
2.4
32
81
8
90
30
13
11
45
1.79
12665--12742
33
2.4
33
86
0
102
38
20
6
34
1.78

Tables:   1

The End!