Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021218.1 Corchorus olitorius cultivar O-4 contig21251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10134

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--641
201
3.2
201
87
2
912
34
14
19
32
1.91
1155--1179
13
1.9
13
100
0
50
40
0
8
52
1.31
2093--2163
21
3.3
21
73
9
63
52
12
8
26
1.68
2248--2433
21
8.6
21
67
15
67
48
4
9
37
1.56
2199--2434
70
3.2
70
67
17
197
48
5
9
36
1.60
2400--2443
21
2.2
20
84
8
54
52
4
6
36
1.49
2199--2503
152
2.0
152
98
0
583
48
4
10
36
1.59
2489--2530
20
2.2
19
83
12
50
50
9
4
35
1.56
2537--2585
20
2.5
19
80
6
53
53
12
2
32
1.50
6336--6378
22
1.9
23
95
4
79
37
13
23
25
1.92
9244--9320
30
2.5
31
91
6
115
35
28
10
25
1.89
10017--10059
22
1.9
23
95
4
79
37
13
23
25
1.92

Tables:   1

The End!