Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021226.1 Corchorus olitorius cultivar O-4 contig21259, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17919

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
549--588
20
2.0
20
90
0
62
42
2
12
42
1.56
821--913
49
2.0
47
91
6
152
38
21
5
34
1.76
1168--1298
66
2.0
66
98
0
253
44
12
13
29
1.81
2091--2152
21
2.9
21
90
2
97
53
12
9
24
1.69
2371--2424
20
2.8
19
80
5
63
53
11
5
29
1.59
2465--2513
22
2.3
22
85
3
64
53
6
12
28
1.62
5535--5588
27
2.0
27
85
0
72
12
25
16
44
1.84
5825--6169
192
1.8
191
94
1
611
23
14
21
40
1.90
8051--8109
30
2.0
30
89
0
91
35
13
16
33
1.88
9933--9960
13
2.2
13
100
0
56
85
0
14
0
0.59

Tables:   1

The End!