Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021228.1 Corchorus olitorius cultivar O-4 contig21261, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44291

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12037--12076
20
2.0
20
100
0
80
20
20
25
35
1.96
12810--12919
3
36.7
3
100
0
220
33
0
0
66
0.92
15042--15078
19
1.9
19
88
0
56
40
8
13
37
1.74
16050--16087
7
5.4
7
100
0
76
13
28
28
28
1.94
18081--18116
2
18.0
2
100
0
72
50
0
0
50
1.00
33983--34059
39
2.0
39
94
0
136
29
16
18
35
1.93
36482--36555
37
2.0
37
97
0
139
25
13
20
40
1.89
42800--42829
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!