Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021229.1 Corchorus olitorius cultivar O-4 contig21262, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28565

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
252--285
8
4.4
8
85
7
52
64
0
11
23
1.26
238--285
15
3.2
16
82
8
57
64
0
10
25
1.25
7767--7853
19
4.7
19
65
21
67
13
22
31
32
1.93
7748--7853
55
1.9
55
98
0
203
15
24
27
33
1.95
24277--24333
27
2.1
27
96
0
105
28
26
29
15
1.96
28343--28379
18
2.0
19
94
5
67
27
21
5
45
1.73

Tables:   1

The End!