Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021231.1 Corchorus olitorius cultivar O-4 contig21264, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24724

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2722--2764
20
2.1
21
91
4
70
53
9
13
23
1.69
2812--2887
21
3.6
21
83
3
98
39
7
10
42
1.69
2768--2891
43
2.9
43
85
1
149
37
7
11
43
1.68
5110--5139
14
2.1
15
93
6
53
6
3
20
70
1.25
8200--8238
18
2.1
18
85
4
51
28
15
15
41
1.87
11811--11837
14
1.9
14
100
0
54
0
0
92
7
0.38
12197--12229
16
2.1
16
94
0
57
51
0
12
36
1.39
12348--12416
33
2.1
33
100
0
138
40
5
20
33
1.76

Tables:   1

The End!