Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021234.1 Corchorus olitorius cultivar O-4 contig21267, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27660

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10183--10243
30
2.0
30
96
0
113
49
18
9
22
1.77
17358--17472
57
2.0
56
98
1
221
33
26
1
39
1.66
17367--17478
56
2.0
57
91
3
183
36
24
1
37
1.66
22541--22571
16
1.9
16
100
0
62
32
12
16
38
1.86
24292--24330
20
2.0
20
94
0
69
38
2
23
35
1.68
25098--25242
49
3.0
46
85
5
182
51
4
15
28
1.63
26518--26559
8
5.0
8
88
11
66
26
26
0
47
1.52
26518--26563
18
2.7
17
93
6
76
30
23
0
45
1.53
27149--27182
14
2.4
14
85
0
50
50
2
20
26
1.63
27580--27634
20
2.7
20
81
13
67
0
47
0
52
1.00

Tables:   1

The End!