Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021238.1 Corchorus olitorius cultivar O-4 contig21271, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18730

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5885--5996
57
1.9
57
87
5
163
32
14
20
33
1.92
7258--7327
36
1.9
36
91
0
113
21
10
8
60
1.55
7840--8448
205
3.0
205
96
1
1111
44
8
11
35
1.71
8568--8648
39
2.0
40
92
2
137
37
3
8
50
1.51
9253--9282
6
4.8
6
95
4
51
50
0
13
36
1.42
13561--13738
60
3.0
60
95
1
315
42
11
14
31
1.81
17269--17529
107
2.5
104
87
3
364
40
9
9
40
1.69
18106--18135
6
4.8
6
95
4
51
36
13
0
50
1.42
18106--18142
12
2.9
13
88
8
58
37
10
0
51
1.37
18419--18467
21
2.5
20
87
9
66
36
4
2
57
1.30

Tables:   1

The End!