Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021239.1 Corchorus olitorius cultivar O-4 contig21272, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19305

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2446--2476
16
1.9
16
100
0
62
38
38
9
12
1.77
4036--4076
22
1.9
22
90
5
66
7
19
2
70
1.22
10676--10766
44
2.1
44
100
0
182
45
8
4
41
1.55
13892--13959
32
2.1
32
91
0
109
36
35
11
16
1.85
13910--13961
16
3.2
16
71
10
52
34
38
11
15
1.83
16075--16113
18
2.2
18
100
0
78
56
0
12
30
1.37
17892--17916
13
1.9
13
100
0
50
40
8
12
40
1.72
18166--18237
36
2.0
36
94
0
126
51
9
9
29
1.67
19154--19256
41
2.6
39
80
10
102
42
13
11
32
1.80
19178--19277
22
4.7
21
77
15
107
44
12
10
34
1.75
19178--19291
22
5.3
22
78
10
92
42
12
11
34
1.78

Tables:   1

The End!