Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021249.1 Corchorus olitorius cultivar O-4 contig21282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31031

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6886--6933
18
2.7
18
96
0
87
50
10
35
4
1.56
6902--6957
28
2.0
28
82
6
69
50
8
33
7
1.61
7946--8155
108
1.9
109
89
0
323
31
26
21
20
1.98
17646--17713
6
11.5
6
73
18
54
82
16
1
0
0.75
17647--17725
11
7.3
10
74
17
61
81
17
1
0
0.77
17663--17732
8
8.2
9
86
10
87
78
20
1
0
0.83
17664--17732
4
16.5
4
81
14
77
78
20
1
0
0.83
17892--18059
83
2.0
83
94
0
291
43
17
15
23
1.87
27145--27283
32
4.3
32
91
0
215
22
20
25
30
1.98

Tables:   1

The End!