Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021252.1 Corchorus olitorius cultivar O-4 contig21285, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44960

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1361--1409
24
2.1
23
81
11
55
46
12
8
32
1.71
15770--15814
21
2.1
21
84
8
56
42
0
26
31
1.56
23682--23717
16
2.4
14
90
9
54
77
0
22
0
0.76
26096--26146
16
3.2
16
75
22
54
35
33
21
9
1.86
26651--26913
131
2.0
131
91
2
422
47
2
11
38
1.51
28487--28633
34
4.6
32
84
15
198
34
16
14
35
1.89
28487--28666
62
2.8
63
89
8
247
33
16
16
33
1.91
36519--36558
15
2.6
16
88
4
55
15
10
12
62
1.54
39530--39569
15
2.6
16
88
4
55
15
10
12
62
1.54
40195--40319
42
3.0
42
82
2
153
49
1
15
33
1.54
40757--40791
15
2.3
15
95
0
61
17
5
31
45
1.71
44520--44545
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!