Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021256.1 Corchorus olitorius cultivar O-4 contig21289, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13891

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
354--406
4
13.2
4
87
0
61
49
9
0
41
1.35
354--406
6
8.8
6
82
0
61
49
9
0
41
1.35
357--405
10
4.9
10
87
0
71
51
10
0
38
1.36
354--405
14
3.9
14
82
10
63
50
9
0
40
1.35
1040--1417
178
2.1
178
86
4
532
36
14
14
34
1.87
3797--3887
3
30.3
3
95
0
164
65
1
1
31
1.06
8645--8683
15
2.5
15
84
16
53
84
0
15
0
0.62
8652--8683
11
2.8
12
86
13
50
84
0
15
0
0.63
12200--12299
48
2.1
48
92
0
164
20
19
25
36
1.95

Tables:   1

The End!