Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021258.1 Corchorus olitorius cultivar O-4 contig21291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10071

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1567--1782
22
9.8
22
76
7
152
41
9
14
34
1.79
1575--1806
44
5.2
45
73
9
192
42
9
13
34
1.77
1616--1804
66
2.9
66
76
3
186
42
8
12
35
1.74
1641--1807
88
1.9
88
85
2
228
41
9
13
34
1.77
1907--2465
22
25.7
22
67
15
146
38
9
14
37
1.79
1907--2071
66
2.5
64
78
11
163
41
8
13
36
1.75
2098--2201
23
4.6
22
78
8
102
35
9
14
40
1.79
2098--2201
46
2.3
44
81
6
120
35
9
14
40
1.79
2433--2480
22
2.2
22
88
0
69
52
12
10
25
1.71
4745--4775
2
16.0
2
93
6
55
51
0
0
48
1.00
8905--8935
3
10.3
3
100
0
62
0
32
0
67
0.91

Tables:   1

The End!