Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021259.1 Corchorus olitorius cultivar O-4 contig21292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9487

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--114
2
58.0
2
96
3
214
0
50
0
49
1.00
1068--1139
36
2.0
36
94
0
126
27
19
30
22
1.98
2058--2119
32
2.0
32
84
6
83
19
20
27
32
1.97
2385--2444
22
2.7
22
94
0
111
5
26
43
25
1.75
6680--6751
36
2.0
36
88
0
108
30
19
29
20
1.97
8279--8516
119
2.0
119
97
0
449
36
19
24
19
1.95
8537--8574
14
2.7
15
92
8
62
71
5
10
13
1.30

Tables:   1

The End!