Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021260.1 Corchorus olitorius cultivar O-4 contig21293, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23232

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2380--2415
17
2.1
17
94
0
63
77
19
0
2
0.88
11520--11544
13
1.9
13
100
0
50
40
8
20
32
1.81
12662--12899
119
2.0
119
94
0
413
35
20
23
20
1.96
12920--12949
15
2.1
15
93
6
53
66
6
13
13
1.43
18308--18596
43
6.6
43
87
3
409
20
26
16
36
1.93
19125--19239
55
2.1
55
86
3
160
24
17
20
37
1.94
19978--20002
2
12.5
2
100
0
50
52
48
0
0
1.00
21334--21393
30
2.0
30
83
3
75
40
6
18
35
1.77
22448--22481
15
2.3
15
89
0
50
8
2
11
76
1.12

Tables:   1

The End!