Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021274.1 Corchorus olitorius cultivar O-4 contig21307, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20885

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2105--2176
32
2.3
32
85
9
103
34
9
29
26
1.88
2110--2190
32
2.6
32
79
15
89
33
9
27
29
1.89
2556--2591
17
2.1
18
89
5
56
2
13
0
83
0.76
8901--8977
31
2.5
31
84
0
100
38
16
9
35
1.81
9121--9180
29
2.0
29
83
9
75
26
10
21
41
1.85
15442--15858
199
2.1
196
93
4
671
40
24
6
28
1.81
15912--16012
48
2.1
49
90
1
159
30
9
30
28
1.89
19697--19795
27
3.7
27
98
0
189
20
17
23
39
1.92

Tables:   1

The End!