Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021275.1 Corchorus olitorius cultivar O-4 contig21308, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12028

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--533
50
10.6
50
91
1
787
30
27
13
28
1.94
6211--6248
2
19.0
2
100
0
76
50
0
0
50
1.00
7666--7707
21
2.0
22
90
4
68
23
30
11
33
1.91
9220--9267
16
3.1
16
69
6
53
45
6
4
43
1.48
9721--9771
12
4.5
11
75
20
52
82
0
11
5
0.83
10160--10218
5
11.6
5
79
16
68
64
16
1
16
1.38
10160--10218
11
5.8
10
79
16
68
64
16
1
16
1.38
10149--10213
30
2.1
30
86
13
89
67
15
1
15
1.30
10160--10218
16
3.9
16
82
17
81
64
16
1
16
1.38
10501--10534
7
4.9
7
92
0
59
85
0
2
11
0.71
10810--10959
50
3.0
50
91
0
237
34
15
12
38
1.85
11372--11662
91
3.2
91
91
2
455
29
19
14
35
1.92
11748--12025
50
5.6
50
94
0
484
28
28
14
28
1.95

Tables:   1

The End!