Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021278.1 Corchorus olitorius cultivar O-4 contig21311, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19577

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5987--6012
1
26.0
1
100
0
52
100
0
0
0
0.00
10326--10524
110
1.8
109
82
9
262
36
8
12
42
1.73
10787--10841
21
2.8
19
86
5
74
36
10
23
29
1.89
12018--12178
69
2.3
70
88
1
243
21
29
23
25
1.99
17900--18474
22
26.4
22
70
15
130
36
14
9
38
1.79
18179--18282
46
2.3
44
81
6
129
39
13
10
36
1.79
18179--18304
68
1.9
67
83
5
164
38
15
10
36
1.81
18574--18769
44
4.4
44
73
10
159
34
12
9
43
1.75
18575--18815
22
10.8
22
72
9
132
34
14
9
41
1.79

Tables:   1

The End!