Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021279.1 Corchorus olitorius cultivar O-4 contig21312, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23870

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7506--7549
22
2.0
22
100
0
88
45
9
22
22
1.80
11951--12024
15
4.7
16
71
19
57
1
35
20
43
1.60
18768--18905
60
2.3
60
88
2
197
36
13
20
30
1.90
18738--18905
31
5.6
30
68
16
89
36
12
19
31
1.89
18945--19109
60
2.8
60
83
0
204
31
20
14
33
1.92
20297--20333
18
2.0
20
84
10
51
40
13
8
37
1.74
20468--20549
22
3.8
22
83
1
103
35
8
10
45
1.70
20540--20588
22
2.2
22
100
0
98
20
16
6
57
1.60
23540--23580
2
20.5
2
94
0
73
51
46
0
2
1.14
23562--23870
4
77.2
4
99
0
591
50
25
0
23
1.50

Tables:   1

The End!