Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021285.1 Corchorus olitorius cultivar O-4 contig21318, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17005

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2272--2304
16
2.1
16
94
5
59
21
6
6
66
1.35
2531--2605
24
3.1
24
86
5
98
26
17
0
56
1.42
5950--6138
33
5.7
33
86
3
213
14
34
34
16
1.89
6293--6333
21
2.0
21
85
0
55
9
19
31
39
1.84
12836--12966
64
2.0
64
100
0
262
25
9
22
43
1.82
16790--16835
6
7.8
6
82
4
58
21
47
28
2
1.62

Tables:   1

The End!