Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021286.1 Corchorus olitorius cultivar O-4 contig21319, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15358

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
180--252
31
2.4
31
76
17
80
26
4
8
61
1.42
506--552
13
3.8
12
78
13
51
40
0
4
55
1.19
677--730
6
9.3
6
76
8
58
27
50
20
1
1.59
678--729
17
3.1
17
94
0
95
25
51
21
1
1.57
719--839
32
3.8
32
87
3
156
37
40
14
7
1.75
719--839
16
7.6
16
78
8
131
37
40
14
7
1.75
5551--5580
3
10.0
3
100
0
60
66
0
0
33
0.92
5687--5722
17
2.1
17
100
0
72
36
0
22
41
1.54
5664--5745
40
2.0
40
100
0
164
37
0
21
40
1.54
5663--5750
23
4.1
23
83
16
134
38
0
21
39
1.54
11549--11632
23
3.9
22
73
12
75
22
40
17
19
1.91

Tables:   1

The End!