Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021292.1 Corchorus olitorius cultivar O-4 contig21325, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27307

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
554--1188
154
4.1
154
93
0
1065
21
19
19
39
1.92
554--1188
307
2.1
308
92
0
1065
21
19
19
39
1.92
6969--7011
21
2.1
21
86
4
61
27
20
18
32
1.96
15842--15873
7
4.6
7
100
0
64
0
12
0
87
0.54
15837--15880
14
3.3
13
84
12
54
0
13
0
86
0.57
15842--15887
21
2.2
21
84
7
58
4
10
0
84
0.75
16046--16127
32
2.6
32
100
0
164
30
6
13
50
1.66
16781--16805
2
12.5
2
100
0
50
48
0
0
52
1.00
25283--25422
33
4.2
34
76
14
107
44
20
8
26
1.80
25331--25457
66
1.9
66
83
3
166
42
22
9
25
1.83

Tables:   1

The End!