Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021298.1 Corchorus olitorius cultivar O-4 contig21331, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46643

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1143--1183
18
2.3
18
100
0
82
29
21
17
31
1.96
14290--14365
29
2.6
30
78
2
91
36
22
9
31
1.86
14530--14588
31
1.9
31
92
0
100
30
20
11
37
1.89
15372--15401
9
3.3
9
100
0
60
33
10
13
43
1.77
17380--17422
22
2.0
22
81
9
52
16
9
11
62
1.53
21049--21132
30
2.8
30
94
3
143
20
15
4
59
1.54
21070--21124
14
3.8
14
79
9
65
18
16
3
61
1.48
23999--24041
22
2.0
22
81
9
52
16
9
11
62
1.53
31369--31406
17
2.3
17
81
4
51
28
0
2
68
1.03
34992--35104
56
2.0
56
84
0
145
36
20
15
27
1.93

Tables:   1

The End!