Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021305.1 Corchorus olitorius cultivar O-4 contig21338, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9910

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1789--1868
40
2.0
40
85
0
106
50
6
10
33
1.61
2265--2292
4
7.0
4
100
0
56
25
0
25
50
1.50
6025--6162
66
2.1
66
98
0
267
22
5
28
42
1.76
6226--6371
78
1.9
78
97
0
274
22
5
26
45
1.74
6725--7710
437
2.2
434
82
4
1122
43
12
13
30
1.81

Tables:   1

The End!