Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021306.1 Corchorus olitorius cultivar O-4 contig21339, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12435

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1699--1744
20
2.3
20
82
14
51
60
6
0
32
1.22
4096--4168
29
2.5
30
91
8
123
15
13
38
32
1.86
4294--4351
28
2.0
31
86
10
86
36
8
18
36
1.82
4347--4405
27
2.2
27
84
0
73
23
8
10
57
1.59
7225--7264
15
2.6
16
88
4
55
17
10
10
62
1.53
10323--10382
30
2.0
30
87
6
86
41
6
18
33
1.76

Tables:   1

The End!