Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021321.1 Corchorus olitorius cultivar O-4 contig21354, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14764

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9622--9705
24
3.8
21
75
17
73
64
16
2
16
1.40
9655--9711
13
4.5
13
73
22
59
66
15
1
15
1.33
9684--9717
6
5.7
6
86
13
52
70
14
0
14
1.17
9622--9705
21
3.8
22
76
14
75
64
16
2
16
1.40
10319--10555
50
4.7
50
89
4
336
36
16
13
34
1.87
10315--10555
100
2.4
100
90
1
376
36
16
12
34
1.87
11155--11587
50
8.7
50
96
0
751
29
28
14
27
1.95
11599--11729
50
2.6
50
91
2
201
36
9
24
29
1.88
11984--12073
28
3.3
27
79
7
92
21
16
22
40
1.92

Tables:   1

The End!