Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021341.1 Corchorus olitorius cultivar O-4 contig21374, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16279

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2533--2587
21
2.6
21
91
0
83
14
21
47
16
1.82
2856--3027
75
2.3
75
84
0
227
12
27
41
18
1.86
5833--5918
30
3.0
27
79
16
93
37
18
9
34
1.83
6344--6385
15
2.7
15
88
3
57
64
14
11
9
1.50
10038--10139
33
3.1
33
91
1
161
26
29
17
26
1.98

Tables:   1

The End!