Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021357.1 Corchorus olitorius cultivar O-4 contig21390, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21813

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1534--1591
29
2.0
29
90
6
91
36
12
13
37
1.82
2236--2283
17
2.9
17
84
3
53
58
4
0
37
1.18
8354--8387
16
2.1
16
100
0
68
17
5
17
58
1.57
9612--9668
30
1.9
30
82
10
73
29
15
8
45
1.77
10541--10742
101
2.0
101
100
0
404
32
25
16
24
1.96
11134--11191
26
2.4
24
86
11
75
48
12
20
18
1.80
18810--18868
28
2.1
28
93
0
100
37
20
0
42
1.52
19514--19614
49
2.1
49
98
0
193
29
26
13
29
1.94

Tables:   1

The End!