Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021358.1 Corchorus olitorius cultivar O-4 contig21391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52562

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4285--4312
8
3.5
8
100
0
56
0
14
0
85
0.59
23852--23876
1
25.0
1
100
0
50
100
0
0
0
0.00
26154--26212
29
2.0
30
93
3
102
28
13
25
32
1.94
34212--34260
21
2.3
21
80
13
57
26
6
4
63
1.36
34486--34515
5
6.0
5
92
0
51
0
43
0
56
0.99
34989--35040
23
2.3
23
100
0
104
26
25
3
44
1.71
47489--47591
51
2.0
50
81
5
118
20
21
13
44
1.85

Tables:   1

The End!