Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021359.1 Corchorus olitorius cultivar O-4 contig21392, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17289

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3078--3180
51
2.0
50
81
5
118
20
21
13
44
1.85
4365--4399
2
17.5
2
100
0
70
48
0
0
51
1.00
4535--4585
25
2.0
25
100
0
102
35
7
15
41
1.76
5234--5295
25
2.6
24
87
5
81
59
4
6
29
1.43
9430--9510
38
2.2
37
88
2
117
16
41
39
2
1.61
9609--9638
4
7.8
4
92
7
53
80
0
0
20
0.72
13195--13225
2
15.5
2
100
0
62
51
0
0
48
1.00
13660--13694
14
2.4
14
95
4
61
45
2
42
8
1.49

Tables:   1

The End!