Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021364.1 Corchorus olitorius cultivar O-4 contig21397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14922

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
889--953
32
2.0
32
93
0
112
43
9
10
36
1.72
1960--2007
3
15.7
3
78
4
51
62
2
6
29
1.31
4454--4530
29
2.5
31
79
6
86
28
31
14
25
1.95
4823--4899
29
2.6
30
83
6
102
31
9
27
32
1.88
10362--10401
18
2.2
19
86
4
55
32
0
17
50
1.47
12295--12340
20
2.2
20
84
3
56
28
10
23
36
1.89

Tables:   1

The End!