Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021370.1 Corchorus olitorius cultivar O-4 contig21403, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8249

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1404--1555
3
50.3
3
98
1
295
66
0
0
33
0.92
2114--2145
2
16.0
2
93
0
55
46
0
0
53
1.00
2405--2455
14
3.7
13
87
12
75
45
0
1
52
1.12
2413--2452
7
5.7
7
88
11
64
42
0
0
57
0.98
2406--2443
19
2.0
19
94
0
67
42
0
2
55
1.14
2405--2455
2
27.5
2
78
21
58
45
0
1
52
1.12
3285--3328
22
1.9
24
86
9
65
38
27
15
18
1.91
4122--4871
372
2.0
377
94
1
1312
47
4
11
36
1.60
6951--6980
15
2.0
15
100
0
60
53
20
13
13
1.72

Tables:   1

The End!