Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021376.1 Corchorus olitorius cultivar O-4 contig21409, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9115

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
624--841
109
2.0
109
95
0
391
46
10
22
21
1.81
1136--1182
8
5.9
8
90
7
51
44
4
0
51
1.21
1147--1182
2
18.0
2
94
0
63
47
2
0
50
1.15
1311--1345
13
2.8
12
91
8
61
40
8
0
51
1.33
2829--2858
2
15.0
2
100
0
60
50
0
0
50
1.00
8422--8489
21
3.2
21
83
8
93
0
51
0
48
1.00
8403--8473
9
7.2
9
72
17
52
0
52
0
47
1.00
8764--8843
37
2.1
38
90
6
128
18
20
28
32
1.96

Tables:   1

The End!