Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021377.1 Corchorus olitorius cultivar O-4 contig21410, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8686

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
229--258
13
2.4
12
94
5
51
60
0
0
40
0.97
2957--3006
24
2.1
24
92
0
82
52
14
2
32
1.53
3460--3513
22
2.5
22
84
6
65
44
7
12
35
1.71
3640--3701
22
2.9
21
80
15
72
40
8
12
38
1.73
3775--4288
22
23.5
21
68
15
163
36
11
16
34
1.85
3776--3953
48
4.1
44
71
23
130
37
8
17
35
1.82
3967--4024
23
2.5
23
83
5
73
36
3
18
41
1.68
7858--7892
17
2.0
18
94
5
63
40
5
20
34
1.76
7877--8014
22
6.2
22
73
9
111
36
9
15
39
1.79
7889--8014
66
1.9
66
80
9
150
36
9
13
40
1.77

Tables:   1

The End!