Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021386.1 Corchorus olitorius cultivar O-4 contig21419, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24485

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4689--4746
20
2.8
20
79
7
71
51
13
13
20
1.75
4794--4874
22
3.7
22
80
4
85
38
9
11
40
1.74
4932--4968
2
18.5
2
100
0
74
51
0
0
48
1.00
5501--5544
21
2.1
21
100
0
88
36
18
0
45
1.49
5645--5705
30
2.0
32
90
6
99
55
9
14
19
1.67
5642--5715
30
2.6
29
81
12
89
56
9
14
18
1.65
8376--8401
7
3.7
7
100
0
52
26
11
0
61
1.30
17873--17913
22
1.9
22
85
5
57
17
12
0
70
1.16
17925--18026
6
16.8
6
84
8
118
0
22
0
77
0.77
18045--18122
29
2.7
29
95
0
138
5
44
39
10
1.60
20109--20155
22
2.1
22
92
0
76
27
23
6
42
1.78
22720--22763
23
1.9
23
95
0
79
59
9
13
18
1.60
24054--24087
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!