Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021387.1 Corchorus olitorius cultivar O-4 contig21420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11828

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--45
2
21.0
2
100
0
84
50
0
0
50
1.00
553--862
152
2.0
153
96
1
570
39
6
20
33
1.78
1868--1898
2
15.5
2
93
0
53
45
0
3
51
1.17
2279--2331
1
53.0
1
76
0
52
88
11
0
0
0.51
2278--2331
5
11.0
5
90
2
74
87
12
0
0
0.56
2278--2331
25
2.2
25
93
3
92
87
12
0
0
0.56
2278--2331
20
2.7
20
97
0
99
87
12
0
0
0.56
3752--3840
43
2.0
44
85
6
119
38
7
13
40
1.74
3647--3840
22
9.0
21
72
13
92
40
7
14
37
1.75
3899--3946
2
24.5
2
87
4
71
54
0
0
45
0.99
4800--4829
15
1.9
16
93
6
53
60
10
23
6
1.52

Tables:   1

The End!